BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023A01SP1|AL427978
(952 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1806 1097 0.0
3x_Contig33 928 0.0
3x_Contig63 721 0.0
3x_Contig1015 601 e-172
3x_Contig1745 159 8e-39
>3x_Contig1806
Length = 53694
Score = 1097 bits (551), Expect = 0.0
Identities = 831/923 (90%), Gaps = 3/923 (0%)
Strand = Plus / Minus
Query: 17 ggaagttattctatttctttactaaaaatcataagacataaaagacatctagttacatta 76
|||| |||||||||||||||||||||||||||| |||||||||||||||||| ||| |||
Sbjct: 52812 ggaaattattctatttctttactaaaaatcatacgacataaaagacatctagatacttta 52753
Query: 77 taaatgtggacagtgaa-catgtttgtmattaaccgtattgctcaactacaaacctgacc 135
|||||||||||||| || |||||| | || ||||||| |||||||||||||| ||
Sbjct: 52752 taaatgtggacagtaaaacatgttgcaagtgaagcgtattggccaactacaaacctgtcc 52693
Query: 136 agtaagaggttttctccacgtcgaaagattcactcaggacaatgtcatcggaagaagtac 195
| || |||||||||| ||||||||||||||||||||| ||||||||||| ||||| || |
Sbjct: 52692 aatacgaggttttcttcacgtcgaaagattcactcagcacaatgtcatctgaagatgtgc 52633
Query: 196 ctaccaagactttgtactgaccagcttctgaacaccacttaccgacttcttcatcgaaga 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52632 ctaccaagactttgtactgaccagcttctgaacaccacttaccgacttcttcatcgaaga 52573
Query: 256 aggagacagagtccttcaagactaaatcaatctttg-ctgtttcggtttgcccgggttga 314
|||| | ||| |||||||||| |||||||| ||||| |||||||| ||||||| ||||||
Sbjct: 52572 aggaaatagaatccttcaagattaaatcaa-ctttgactgtttcgttttgcccaggttga 52514
Query: 315 agtaaaactttcttgaatcccttcaactccttcactgccctagaaacagatgattcagta 374
|| |||| ||||||||||||||||||||| || ||||||||||||| ||||||||||||
Sbjct: 52513 agcaaaattttcttgaatcccttcaactctttgactgccctagaaaaagatgattcagtc 52454
Query: 375 gcagcmatataaacttgtacgacttcagatcccgcatatttctcacctgtgttcttaaca 434
||||| || |||| |||||||||||| |||||||||||| |||||||| |||||| |||
Sbjct: 52453 gcagcaatgtaaatttgtacgacttcggatcccgcatatgcctcacctgcgttctttaca 52394
Query: 435 tcaacagaaacagagataacttcgtcatttatttgaacttgcagattagataaggcaaat 494
| |||||||||||||||||| || |||| |||| ||||| ||||||||||| ||||||
Sbjct: 52393 ttaacagaaacagagataacctcctcatccgtttgtacttgtagattagataaagcaaat 52334
Query: 495 tcggtataagataacccgtaaccgaaggggaatgccactcttttttgcagcttttcatag 554
|| |||||||||||||||||||||||||||||||| |||||| |||||| ||| ||||||
Sbjct: 52333 tcagtataagataacccgtaaccgaaggggaatgcaactcttctttgcaacttctcatag 52274
Query: 555 aatctgtatccaatgaraatatcctcaccgtagacaactctgccaaattcagtcttgaag 614
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 52273 aatctgtatccaatgaaaatatcctcaccgtagagaactctgccaaattcagtcttgaag 52214
Query: 615 ttcaaataagctggattgtcttcaagctttaatggccatgagagagataatttcccattt 674
|||||||||| ||| || |||||||| |||| ||||||||||||||||||||| ||| ||
Sbjct: 52213 ttcaaataagttgggttatcttcaaggtttattggccatgagagagataatttaccactt 52154
Query: 675 ggracaacatcaccatacaagacgtcagcaatagcattacccagctcattgcctccgtac 734
|| | ||| |||||||||||||| |||||||||||||| |||| |||||| |||||||||
Sbjct: 52153 ggaataacgtcaccatacaagacatcagcaatagcattgcccaactcattacctccgtac 52094
Query: 735 caagcttgaaccagagcmttagctttttgtaaccatgggaactcgacaggagtaccagac 794
|||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 52093 caagcttgaatgagagctttagctttttgtaatcatgggaactcgacaggagtaccagac 52034
Query: 795 tggttgacaattacagtgttagggttagcctccaatacagcacgaactagatcgtttgtt 854
||||||||||||||||||||||| || |||||||| |||||||| || ||||||||||||
Sbjct: 52033 tggttgacaattacagtgttaggattggcctccaaaacagcacggacgagatcgtttgtt 51974
Query: 855 cttgctggcaacgtcatatcttccctatcatggccctcagattcccattcagcattcaaa 914
||| ||||||| |||||||||||||||||||| || |||||||||||||| || ||||||
Sbjct: 51973 cttcctggcaaagtcatatcttccctatcatgaccttcagattcccattctgcgttcaaa 51914
Query: 915 ccgatgcataaaatggctttatc 937
|| || |||||||||||||||||
Sbjct: 51913 ccaatacataaaatggctttatc 51891
>3x_Contig33
Length = 834
Score = 928 bits (466), Expect = 0.0
Identities = 510/522 (97%), Gaps = 3/522 (0%)
Strand = Plus / Plus
Query: 1 gatcagaactaaaagaggaagttattctatttctttactaaaaatcataagacataaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gatcagaactaaaagaggaagttattctatttctttactaaaaatcataagacataaaag 252
Query: 61 acatctagttacattataaatgtggacagtgaa-catgtttgtmattaaccgtattgctc 119
||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 253 acatctagttacattataaatgtggacagtgaaacatgtttgtaattaaccgtattgctc 312
Query: 120 aactacaaacctgaccagtaagaggttttctccacgtcgaaagattcactcaggacaatg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aactacaaacctgaccagtaagaggttttctccacgtcgaaagattcactcaggacaatg 372
Query: 180 tcatcggaagaagtacctaccaagactt-tgtactgaccagcttctgaacaccacttacc 238
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 373 tcatcggaagaagtacctaccaagacttgtgtactgaccagcttctgaacaccacttacc 432
Query: 239 gacttcttcatcgaagaaggagacagagtccttcaagactaaatcaatctttgctgtttc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gacttcttcatcgaagaaggagacagagtccttcaagactaaatcaatctttgctgtttc 492
Query: 299 ggtttgcccgggttgaagtaaaactttcttgaatcccttcaactccttcactgccctaga 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ggtttgcccgggttgaagtaaaactttcttgaatcccttcaactccttcactgccctaga 552
Query: 359 aacagatgattcagtagcagcmatat-aaacttgtacgacttcagatcccgcatatttct 417
||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 553 aacagatgattcagtagcagcaatataaaacttgtacgacttcagatcccgcatatttct 612
Query: 418 cacctgtgttcttaacatcaacagaaacagagataacttcgtcatttatttgaacttgca 477
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 613 cacctgtgttcttaacatcaacagaaacagagataacttcttcatttatttgaacttgca 672
Query: 478 gattagataaggcaaattcggtataagataacccgtaaccga 519
||||| |||| |||||||| || ||| || ||||||||||||
Sbjct: 673 gattaaataaagcaaattctgtgtaaaatgacccgtaaccga 714
>3x_Contig63
Length = 856
Score = 721 bits (362), Expect = 0.0
Identities = 558/624 (89%), Gaps = 1/624 (0%)
Strand = Plus / Plus
Query: 122 ctacaaacctgaccagtaagaggttttctccacgtcgaaagattcactcaggacaatgtc 181
||||||||||| ||| || |||||||||| |||||||||| |||||||||| |||||| |
Sbjct: 197 ctacaaacctgtccaatacgaggttttcttcacgtcgaaaaattcactcagcacaatgcc 256
Query: 182 atcggaagaagtacctaccaagactttgtactgaccagcttctgaacaccacttaccgac 241
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 atcggaagatgtgcctaccaagactttgtactgaccagcttctgaacaccacttaccgac 316
Query: 242 ttcttcatcgaagaaggagacagagtccttcaagactaaatcaatctttgctgtttcggt 301
||||||||| |||||||| | |||||||||||||| ||||||||| || ||||||| |
Sbjct: 317 ttcttcatcaaagaaggaaatagagtccttcaagattaaatcaattttgactgtttcatt 376
Query: 302 ttgcccgggttgaagtaaaactttcttgaatcccttcaactccttcactgccctagaaac 361
|||||| ||||||||||||| ||||||||||||||||||||| || ||||||||||||||
Sbjct: 377 ttgcccaggttgaagtaaaattttcttgaatcccttcaactctttgactgccctagaaac 436
Query: 362 agatgattcagtagcagcmatataaacttgtacgacttcagatccc-gcatatttctcac 420
|||||||||||| ||||| || |||| |||||||||||| |||||| ||||||| |||||
Sbjct: 437 agatgattcagtcgcagcaatgtaaatttgtacgacttcggatccccgcatattcctcac 496
Query: 421 ctgtgttcttaacatcaacagaaacagagataacttcgtcatttatttgaacttgcagat 480
| |||||||| |||| |||||||||||||||||| || |||| |||| ||||| ||||
Sbjct: 497 ccgtgttctttacattaacagaaacagagataacctcctcatccgtttgtacttgtagat 556
Query: 481 tagataaggcaaattcggtataagataacccgtaaccgaaggggaatgccactctttttt 540
|||||| |||||||| |||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 557 gagataaagcaaattcagtataagataacccgtaaccgaaggggaatgcaactcttcttt 616
Query: 541 gcagcttttcatagaatctgtatccaatgaraatatcctcaccgtagacaactctgccaa 600
||| ||| ||||| |||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 617 gcaacttctcataaaatctgtatccaatgaaaatatcctcaccgtagagaactctgccaa 676
Query: 601 attcagtcttgaagttcaaataagctggattgtcttcaagctttaatggccatgagagag 660
|||||||||||||||||||||||| ||| || |||||||| |||||||||||||| ||||
Sbjct: 677 attcagtcttgaagttcaaataagttgggttatcttcaagttttaatggccatgacagag 736
Query: 661 ataatttcccatttggracaacatcaccatacaagacgtcagcaatagcattacccagct 720
||||||| ||| ||| ||||| || || |||||||| || ||||||||||| ||||| |
Sbjct: 737 ataatttaccacctggaacaacgtccccgtacaagacatcggcaatagcattgcccagtt 796
Query: 721 cattgcctccgtaccaagcttgaa 744
|||| |||||||||||||||||||
Sbjct: 797 cattacctccgtaccaagcttgaa 820
>3x_Contig1015
Length = 4152
Score = 601 bits (302), Expect = e-172
Identities = 315/320 (98%), Gaps = 1/320 (0%)
Strand = Plus / Minus
Query: 633 tcttcaagctttaatggccatgagagagataatttcccattt-ggracaacatcaccata 691
||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 4152 tcttcaagctttaatagccatgagagagataatttcccattttggaacaacatcaccata 4093
Query: 692 caagacgtcagcaatagcattacccagctcattgcctccgtaccaagcttgaaccagagc 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4092 caagacgtcagcaatagcattacccagctcattgcctccgtaccaagcttgaaccagagc 4033
Query: 752 mttagctttttgtaaccatgggaactcgacaggagtaccagactggttgacaattacagt 811
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4032 attagctttttgtaaccatgggaactcgacaggagtaccagactggttgacaattacagt 3973
Query: 812 gttagggttagcctccaatacagcacgaactagatcgtttgttcttgctggcaacgtcat 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3972 gttagggttagcctccaatacagcacgaactagatcgtttgttcttgctggcaacgtcat 3913
Query: 872 atcttccctatcatggccctcagattcccattcagcattcaaaccgatgcataaaatggc 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3912 atcttccctatcatggccctcagattcccattcagcattcaaaccgatgcataaaatggc 3853
Query: 932 tttatcatgagcggstgcaa 951
|||||||||||||| |||||
Sbjct: 3852 tttatcatgagcggctgcaa 3833
>3x_Contig1745
Length = 19830
Score = 159 bits (80), Expect = 8e-39
Identities = 134/152 (88%)
Strand = Plus / Plus
Query: 783 ggagtaccagactggttgacaattacagtgttagggttagcctccaatacagcacgaact 842
||||||||||||||||||| || ||||||||||| || ||||| || |||||||| ||
Sbjct: 62 ggagtaccagactggttgatgatgacagtgttaggattggcctctaagacagcacggacg 121
Query: 843 agatcgtttgttcttgctggcaacgtcatatcttccctatcatggccctcagattcccat 902
||||||||||||||| ||||||| ||||||||||||||||||| || ||||||||||||
Sbjct: 122 agatcgtttgttcttcctggcaagatcatatcttccctatcatgaccttcagattcccat 181
Query: 903 tcagcattcaaaccgatgcataaaatggcttt 934
|| || |||||||| || ||||||||||||||
Sbjct: 182 tctgcgttcaaaccaatacataaaatggcttt 213
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6223
Number of Sequences: 1807
Number of extensions: 6223
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 5
length of query: 952
length of database: 10,358,551
effective HSP length: 16
effective length of query: 936
effective length of database: 10,329,639
effective search space: 9668542104
effective search space used: 9668542104
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)